← Feed

Posts

• Post #4182590

  RE: https://mastodon.social/@egonw/116753932826141631 my biocurator blood makes me a sucker for doing more curation to make metadata completeness numbers go up @rogue_scholar is there documentation somewhere on how to encode metadata in my posts to get my ORCiD, ROR, and other metadata propagated correctly?

• Post #4182589

  a blog post on comparing overlapping SSSOM curations from two different curators, as part of @NFDI4Chem https://cthoyt.com/2026/06/19/comparing-sssom.html #sssom #semanticweb #owl #ontologies

• Post #4182588

  I have an opening in my group at RWTH Aachen University for a research internship for a bachelor or master's student in chemistry or computer science who would like to learn about cheminformatics methods in catalyst design for plastics recycling more info: https://zenodo.org/records/20758266 #cheminformatics #circulareconomy #recycling #chemistry #internship #informatics #inorganic

• Post #2005942

  do i just dislike the font that AI-generated (scientific) images use? Is it that I can see the kerning is bad? Or do I just have disdain that they are AI-generated?

• Post #1692364

  SSSOM now specifies an algorithm for hashing records (i.e., rows in a SSSOM TSV file) to support interoperability across implementations and make semantic mappings more FAIR 📖 https://mapping-commons.github.io/sssom/spec-support-hashing Implementations are already available in SSSOM-Java and sssom-pydantic huge thanks to @dgouttegattat for leading the development of this part of the SSSOM spec! #sssom #owl #semanticweb #obo #fair

• Post #913641

  I blogged about software I wrote for efficiently downloading and querying @opencitations in bulk 📖 blog: https://cthoyt.com/2026/02/10/opencitations-client.html 💽 code: https://github.com/cthoyt/opencitations-client #opencitations #bibliometrics #opensource #python #knowledgegraphs

• Post #909823

  RE: https://genomic.social/@biocurator/116165946498006598 lots of work went into planning the virtual conference series this year. please join, especially if you're not in the bio- part of the curation and FAIR data world to have cross-disciplinary exchange!

• Post #909821

  RE: https://mastodon.social/@sethmlarson/116229292847984092 I just added a human.json to my blog too! I like writing and creating and won't start offloading that to AI anytime soon. commit: https://github.com/cthoyt/cthoyt.github.io/commit/9bae6226153749ba966fcb1f657f0c913c4ecad4

• Post #909820

  Astral (makers of uv and ruff) will be acquired by OpenAI (https://openai.com/index/openai-to-acquire-astral) 😐 #python

• Post #909818

  that feeling when someone sends a pull request that includes modifications to turn off linter checks they didn't pass

• Post #909816

  RE: https://sigmoid.social/@osma/116328364922932251 cool stuff from the SKOS and SKOSMOS crew :)

• Post #832559

  i've written about my experience at the @deNBI BioHackathon Germany 2025 on the "On the Path to Machine-actionable Training Materials" team with the @dalia, TeSS, and Bioschemas teams #bhg2025 https://cthoyt.com/2025/12/09/biohackathon-de-2025.html